STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41924.1Pfam:pfam06707 Protein of unknown function (DUF1194). (266 aa)    
Predicted Functional Partners:
AMS41925.1
Crystallin; Pfam:pfam00030 Beta/Gamma crystallin.
       0.527
AMS42086.1
Hypothetical protein; Pfam:pfam12804 MobA-like NTP transferase domain.
  
     0.492
AMS41923.1
Hypothetical protein.
       0.484
AMS40371.1
Zn-dependent hydrolase; Pfam:pfam13483 Beta-lactamase superfamily domain.
  
    0.470
AMS43789.1
Hypothetical protein; Pfam:pfam09413 Domain of unknown function (DUF2007).
  
     0.469
AMS42758.1
Pfam:pfam09361 Phasin protein.
  
     0.435
AMS44083.1
Phasin; Pfam:pfam09361 Phasin protein.
  
     0.429
AMS39435.1
Cytochrome C oxidase subunit I; Pfam:pfam09955 Predicted integral membrane protein (DUF2189).
  
    0.416
AMS42476.1
Phasin; Pfam:pfam09361 Phasin protein.
  
     0.413
AMS41105.1
Membrane protein; Pfam:pfam04280 Tim44-like domain.
  
     0.400
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.