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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaS_5AraC family transcriptional regulator; Pfam:pfam13278 Putative amidotransferase. (333 aa)    
Predicted Functional Partners:
AMS40884.1
Pfam:pfam04267 Sarcosine oxidase, delta subunit family.
 
    0.671
AMS40886.1
Pfam:pfam04268 Sarcosine oxidase, gamma subunit family.
 
    0.576
AMS40885.1
Sarcosine oxidase subunit alpha; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 
     0.565
AMS40882.1
Sarcosine oxidase subunit beta; Pfam:pfam01266 FAD dependent oxidoreductase.
  
     0.529
AMS41906.1
(2Fe-2S)-binding protein; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 
     0.523
AMS41907.1
Hypothetical protein; Pfam:pfam04267 Sarcosine oxidase, delta subunit family.
 
    0.514
AMS41908.1
Sarcosine oxidase subunit beta; Pfam:pfam01266 FAD dependent oxidoreductase.
  
     0.482
AMS41927.1
Hypothetical protein.
       0.405
AMS43099.1
N-methylproline demethylase; Pfam:pfam00724 NADH:flavin oxidoreductase / NADH oxidase family.
 
    0.401
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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