STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41942.1Pfam:pfam07796 Protein of unknown function (DUF1638). (215 aa)    
Predicted Functional Partners:
AMS41938.1
Hypothetical protein; Pfam:pfam13769 Virulence factor.
 
     0.862
AMS41934.1
Drug:proton antiporter; Pfam:pfam14574 Domain of unknown function (DUF4445).
 
   
 0.850
metH_2
Methyltetrahydrofolate:corrinoid methyltransferase; Pfam:pfam00809 Pterin binding enzyme.
 
     0.842
AMS41944.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Pfam:pfam02310 B12 binding domain.
 
     0.785
AMS41945.1
Pfam:pfam06253 Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
 
     0.785
AMS43103.1
Pfam:pfam06253 Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
 
     0.785
AMS41965.1
Methyltransferase; Pfam:pfam06253 Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
 
     0.784
AMS41957.1
Methionine synthase; Pfam:pfam02574 Homocysteine S-methyltransferase.
 
     0.749
AMS41941.1
Hypothetical protein.
       0.681
AMS42338.1
Helix-turn-helix domain-containing protein; Pfam:pfam12844 Helix-turn-helix domain.
  
     0.611
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.