Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS41946.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
AMS44300.1
Formate dehydrogenase subunit alpha; Pfam:pfam00384 Molybdopterin oxidoreductase.
   
 
 0.839
AMS40691.1
Pfam:pfam01012 Electron transfer flavoprotein domain.
   
 
 0.831
AMS41945.1
Pfam:pfam06253 Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
 
     0.804
AMS39941.1
Succinate dehydrogenase; Pfam:pfam00890 FAD binding domain; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.792
napD
NapD family protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
  
 0.680
AMS41938.1
Hypothetical protein; Pfam:pfam13769 Virulence factor.
  
     0.638
AMS41855.1
NADH dehydrogenase; Pfam:pfam01257 Thioredoxin-like [2Fe-2S] ferredoxin.
   
 
 0.637
AMS44250.1
NADH:ubiquinone oxidoreductase 24 kD subunit; Pfam:pfam01257 Thioredoxin-like [2Fe-2S] ferredoxin.
   
 
 0.637
nuoE
Formate dehydrogenase; Pfam:pfam01257 Thioredoxin-like [2Fe-2S] ferredoxin.
   
 
 0.637
AMS41965.1
Methyltransferase; Pfam:pfam06253 Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
  
     0.636
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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