STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41973.1Transcriptional regulator. (205 aa)    
Predicted Functional Partners:
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.773
AMS39425.1
Hypothetical protein.
  
     0.743
AMS39649.1
Hypothetical protein; Pfam:pfam07478 D-ala D-ala ligase C-terminus.
  
     0.704
AMS41430.1
Tetratricopeptide repeat protein.
  
     0.651
AMS42226.1
Hypothetical protein.
  
     0.646
AMS42284.1
Hypothetical protein; Pfam:pfam09925 Predicted membrane protein (DUF2157).
  
     0.626
AMS42261.1
Pfam:pfam05036 Sporulation related domain.
  
     0.616
AMS42377.1
Pfam:pfam13505 Outer membrane protein beta-barrel domain.
  
     0.616
AMS41961.1
Pfam:pfam12974 ABC transporter, phosphonate, periplasmic substrate-binding protein.
  
     0.611
AMS41429.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.