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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41984.1Pfam:pfam01042 Endoribonuclease L-PSP. (166 aa)    
Predicted Functional Partners:
AMS41985.1
Pfam:pfam13442 Cytochrome C oxidase, cbb3-type, subunit III.
  
 0.942
AMS41986.1
Flavin monoamine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase.
 
  
 0.886
AMS41983.1
Succinyl-diaminopimelate desuccinylase; Pfam:pfam01546 Peptidase family M20/M25/M40.
  
    0.601
AMS38993.1
Hypothetical protein; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain.
  
   
 0.584
AMS42514.1
Hypothetical protein; Pfam:pfam02129 X-Pro dipeptidyl-peptidase (S15 family).
  
     0.433
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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