STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41988.1Formate dehydrogenase; Pfam:pfam04879 Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (949 aa)    
Predicted Functional Partners:
AMS41989.1
(Fe-S)-binding protein; Pfam:pfam13247 4Fe-4S dicluster domain.
 
 0.999
AMS41990.1
Hypothetical protein; Pfam:pfam04976 DMSO reductase anchor subunit (DmsC).
 
 0.996
AMS39210.1
Sulfite reductase; Pfam:pfam01077 Nitrite and sulphite reductase 4Fe-4S domain.
    
 0.908
AMS41090.1
Hypothetical protein; Pfam:pfam00581 Rhodanese-like domain.
    
 0.908
AMS42372.1
3-mercaptopyruvate sulfurtransferase; Pfam:pfam00581 Rhodanese-like domain.
    
 0.908
AMS39086.1
Pfam:pfam00175 Oxidoreductase NAD-binding domain.
    
 0.905
AMS41829.1
Hypothetical protein; Pfam:pfam00296 Luciferase-like monooxygenase.
   
 
 0.905
AMS39209.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.904
cysN
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
 0.904
cysD
Sulfate adenylyltransferase subunit 2; Pfam:pfam01507 Phosphoadenosine phosphosulfate reductase family.
     
 0.904
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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