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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS41992.1NADPH:quinone oxidoreductase; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain. (342 aa)    
Predicted Functional Partners:
acpXL
Acyl carrier protein; Pfam:pfam00550 Phosphopantetheine attachment site.
 
  
 0.889
AMS41994.1
Pfam:pfam00109 Beta-ketoacyl synthase, N-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.885
AMS41991.1
Hypothetical protein; Pfam:pfam03279 Bacterial lipid A biosynthesis acyltransferase.
 
   
 0.884
AMS41993.1
Pfam:pfam02801 Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.731
AMS42979.1
Putative membrane protein.
  
     0.572
AMS42069.1
Pfam:pfam09832 Uncharacterized protein conserved in bacteria (DUF2059).
  
     0.467
AMS39806.1
Pfam:pfam00248 Aldo/keto reductase family.
 
  
 0.435
AMS39627.1
Pfam:pfam01073 3-beta hydroxysteroid dehydrogenase/isomerase family.
 
 
 0.428
AMS43779.1
Hypothetical protein.
  
     0.428
AMS40486.1
Hypothetical protein; Pfam:pfam13747 Domain of unknown function (DUF4164).
  
     0.421
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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