Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42000.1Methylamine utilization protein; Pfam:pfam03150 Di-heme cytochrome c peroxidase. (402 aa)    
Predicted Functional Partners:
AMS41999.1
Auxin-binding protein; Pfam:pfam13115 YtkA-like.
     
 0.805
AMS43239.1
Hypothetical protein.
  
 
 0.750
AMS39754.1
Cytochrome CBB3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
  
 0.524
AMS43900.1
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
  
 0.524
AMS44221.1
UDP-galactose-lipid carrier transferase; Pfam:pfam03976 Polyphosphate kinase 2 (PPK2).
  
  
 0.473
AMS41998.1
Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
 0.425
AMS39760.1
Coproporphyrinogen III oxidase; Pfam:pfam04055 Radical SAM superfamily; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
  
 0.421
AMS43968.1
Coproporphyrinogen III oxidase; Pfam:pfam04055 Radical SAM superfamily; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
  
 0.421
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
 0.405
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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