STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42008.1Pfam:pfam07715 TonB-dependent Receptor Plug Domain. (705 aa)    
Predicted Functional Partners:
AMS42011.1
Hypothetical protein; Pfam:pfam01497 Periplasmic binding protein.
 
  
 0.882
AMS42006.1
Hypothetical protein.
 
     0.881
AMS39113.1
Hypothetical protein; Pfam:pfam03544 Gram-negative bacterial TonB protein C-terminal.
 
 
 0.877
AMS42010.1
Iron transporter; Pfam:pfam05171 Haemin-degrading HemS.
 
  
 0.869
hmuV
Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.859
AMS40329.1
TolA, TolA protein.
  
 
 0.809
AMS42012.1
Heme ABC transporter permease; Pfam:pfam01032 FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.788
AMS42007.1
Hypothetical protein.
       0.777
AMS42004.1
Pfam:pfam03992 Antibiotic biosynthesis monooxygenase.
 
     0.673
AMS41151.1
Hypothetical protein.
   
 
 0.628
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.