STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42016.1Abortive infection protein. (389 aa)    
Predicted Functional Partners:
AMS43139.1
NIPSNAP family containing protein; Pfam:pfam07978 NIPSNAP.
 
     0.762
AMS39978.1
EcaC; Pfam:pfam14534 Domain of unknown function (DUF4440).
 
     0.755
AMS42061.1
Hypothetical protein; Pfam:pfam14399 NlpC/p60-like transpeptidase.
  
     0.754
AMS43726.1
Hypothetical protein; Pfam:pfam11706 CGNR zinc finger.
  
     0.725
AMS42017.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
     0.700
AMS40743.1
Pfam:pfam01636 Phosphotransferase enzyme family.
 
     0.698
AMS38992.1
Hypothetical protein.
 
     0.688
AMS43374.1
Hypothetical protein.
  
     0.671
AMS41884.1
Pfam:pfam07786 Protein of unknown function (DUF1624).
  
    0.634
AMS41481.1
Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain.
 
     0.600
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.