STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42031.1Sensor protein ZraS; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (877 aa)    
Predicted Functional Partners:
AMS42032.1
Blue-light-activated protein; Pfam:pfam00072 Response regulator receiver domain.
 
 
0.823
AMS40554.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
0.801
AMS42036.1
FmdB family regulatory protein; Pfam:pfam09723 Zinc ribbon domain.
 
     0.787
AMS42034.1
Formamidase FmdA; Pfam:pfam03069 Acetamidase/Formamidase family.
 
     0.753
AMS40522.1
PAS/PAC sensor hybrid histidine kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
0.618
pyrB
Pfam:pfam00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.602
carB
Pfam:pfam02786 Carbamoyl-phosphate synthase L chain, ATP binding domain; Belongs to the CarB family.
   
 
 0.588
AMS42002.1
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.565
AMS40615.1
Pfam:pfam08543 Phosphomethylpyrimidine kinase.
  
  
 0.521
AMS44303.1
Transcriptional regulator, LuxR family; Pfam:pfam12697 Alpha/beta hydrolase family.
  
 
 0.518
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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