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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42037.1Pfam:pfam13650 Aspartyl protease. (233 aa)    
Predicted Functional Partners:
AMS42038.1
Fe-S oxidoreductase; Pfam:pfam06945 Protein of unknown function (DUF1289).
 
     0.805
AMS41425.1
Pfam:pfam06904 Extensin-like protein C-terminus.
  
     0.531
AMS39752.1
Cytochrome oxidase; Pfam:pfam05751 FixH.
  
     0.528
AMS44143.1
Pfam:pfam11164 Protein of unknown function (DUF2948).
  
     0.526
AMS42039.1
Pfam:pfam02277 Phosphoribosyltransferase.
       0.522
AMS41154.1
Glycoside hydrolase, family 24; Pfam:pfam09343 Conserved hypothetical protein 2217 (DUF2460).
  
     0.513
AMS44331.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.466
AMS43729.1
Hypothetical protein.
  
     0.451
AMS39886.1
Pfam:pfam10984 Protein of unknown function (DUF2794).
  
     0.436
AMS42358.1
Hypothetical protein; Pfam:pfam05128 Domain of unknown function (DUF697).
  
     0.404
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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