Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42043.1Pfam:pfam03167 Uracil DNA glycosylase superfamily. (207 aa)    
Predicted Functional Partners:
AMS42042.1
Pfam:pfam13417 Glutathione S-transferase, N-terminal domain.
       0.845
AMS42041.1
Hypothetical protein; Pfam:pfam00565 Staphylococcal nuclease homologue.
       0.695
lrp_9
ArsR family transcriptional regulator; Pfam:pfam01037 AsnC family.
       0.559
AMS42040.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.508
AMS38988.1
Peptidase M22; Pfam:pfam00814 Glycoprotease family.
  
    0.492
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.448
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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