STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42078.1Hypothetical protein; Pfam:pfam10016 Predicted secreted protein (DUF2259). (240 aa)    
Predicted Functional Partners:
AMS41332.1
Hypothetical protein.
  
     0.727
AMS42949.1
Membrane protein.
  
     0.697
AMS43776.1
Hypothetical protein; Pfam:pfam01183 Glycosyl hydrolases family 25.
  
     0.688
AMS42077.1
Hypothetical protein.
       0.655
AMS40668.1
Pfam:pfam09898 Uncharacterized protein conserved in bacteria (DUF2125).
  
     0.648
AMS42944.1
Hypothetical protein; Pfam:pfam13480 Acetyltransferase (GNAT) domain.
  
     0.648
AMS41768.1
Pfam:pfam13502 AsmA-like C-terminal region.
  
     0.645
AMS42079.1
Pfam:pfam03576 Peptidase family S58.
       0.624
AMS42080.1
Extracellular ligand-binding receptor; Pfam:pfam13458 Periplasmic binding protein.
       0.624
AMS43604.1
Hypothetical protein.
  
     0.622
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.