Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42080.1Extracellular ligand-binding receptor; Pfam:pfam13458 Periplasmic binding protein. (357 aa)    
Predicted Functional Partners:
AMS40264.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.859
AMS42079.1
Pfam:pfam03576 Peptidase family S58.
       0.845
AMS40857.1
Hypothetical protein; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.837
AMS42581.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.831
AMS40265.1
Branched-chain amino acid ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
  
 0.827
AMS40263.1
Leucine/isoleucine/valine transporter subunit membrane component of ABC superfamily; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.825
AMS42605.1
Hypothetical protein; Pfam:pfam00005 ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.791
AMS40266.1
Pfam:pfam00005 ABC transporter.
 
  
 0.757
AMS42078.1
Hypothetical protein; Pfam:pfam10016 Predicted secreted protein (DUF2259).
       0.702
AMS42081.1
4-hydroxyphenylacetate 3-monooxygenase; Pfam:pfam01613 Flavin reductase like domain.
 
     0.602
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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