STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42085.1XdhC/CoxF family protein; Pfam:pfam13478 XdhC Rossmann domain. (236 aa)    
Predicted Functional Partners:
AMS42084.1
XdhC/CoxI family protein; Pfam:pfam02625 XdhC and CoxI family.
     0.995
AMS42086.1
Hypothetical protein; Pfam:pfam12804 MobA-like NTP transferase domain.
 
  
 0.972
AMS40077.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 
  
 0.834
AMS42083.1
Von Willebrand factor A; Pfam:pfam05762 VWA domain containing CoxE-like protein.
 
     0.834
AMS42026.1
Carbon-monoxide dehydrogenase; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 
  
 0.831
AMS43875.1
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein; Pfam:pfam00941 FAD binding domain in molybdopterin dehydrogenase.
 
  
 0.815
AMS42024.1
Carbon monoxide dehydrogenase; Pfam:pfam01799 [2Fe-2S] binding domain.
 
  
 0.812
AMS43874.1
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein; Pfam:pfam01799 [2Fe-2S] binding domain.
 
  
 0.811
AMS40075.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; Pfam:pfam02738 Molybdopterin-binding domain of aldehyde dehydrogenase.
 
  
 0.810
AMS40076.1
Carbon monoxide dehydrogenase; Pfam:pfam01799 [2Fe-2S] binding domain.
 
  
 0.805
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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