Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMS42091.1Plasmid partitioning protein ParB; Pfam:pfam02195 ParB-like nuclease domain. (82 aa)    
Predicted Functional Partners:
AMS39747.1
Chromosome partitioning protein ParA; Pfam:pfam01656 CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.664
AMS39334.1
Hypothetical protein; Pfam:pfam14378 PAP2 superfamily.
 
     0.550
AMS42092.1
Hypothetical protein; Pfam:pfam08327 Activator of Hsp90 ATPase-like protein.
       0.548
AMS39333.1
Hypothetical protein.
 
     0.538
AMS42090.1
Hypothetical protein.
       0.528
rsmG
Hypothetical protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.523
AMS39425.1
Hypothetical protein.
  
   
 0.501
AMS39327.1
Hypothetical protein; Pfam:pfam13400 Putative Flp pilus-assembly TadE/G-like.
  
     0.459
AMS42407.1
Hypothetical protein.
  
     0.453
AMS40787.1
Serine kinase.
  
     0.435
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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