STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42128.1Pfam:pfam00582 Universal stress protein family. (278 aa)    
Predicted Functional Partners:
AMS42129.1
Pfam:pfam00106 short chain dehydrogenase.
  
    0.755
AMS43227.1
Pfam:pfam00582 Universal stress protein family.
  
     0.671
AMS42127.1
Phosphoribosyltransferase; Pfam:pfam00156 Phosphoribosyl transferase domain.
 
  
 0.600
AMS42130.1
Hypothetical protein; Pfam:pfam00696 Amino acid kinase family; Belongs to the carbamate kinase family.
  
    0.584
AMS42131.1
Hypothetical protein; Pfam:pfam12900 Pyridoxamine 5'-phosphate oxidase.
  
  
 0.582
AMS42126.1
Hypothetical protein; Pfam:pfam10025 Uncharacterized conserved protein (DUF2267).
       0.480
AMS43951.1
Short-chain dehydrogenase; Pfam:pfam05940 NnrS protein.
  
     0.463
AMS41470.1
Hypothetical protein; Pfam:pfam01035 6-O-methylguanine DNA methyltransferase, DNA binding domain.
  
  
 0.433
AMS43964.1
NnrS; Pfam:pfam05940 NnrS protein.
  
     0.429
AMS42123.1
Pfam:pfam00582 Universal stress protein family.
 
    
0.406
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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