STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42129.1Pfam:pfam00106 short chain dehydrogenase. (249 aa)    
Predicted Functional Partners:
AMS42128.1
Pfam:pfam00582 Universal stress protein family.
  
    0.760
AMS43496.1
Oxidoreductase, short chain dehydrogenase/reductase family; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
 
  
 0.727
AMS42130.1
Hypothetical protein; Pfam:pfam00696 Amino acid kinase family; Belongs to the carbamate kinase family.
  
    0.585
AMS42127.1
Phosphoribosyltransferase; Pfam:pfam00156 Phosphoribosyl transferase domain.
 
     0.553
AMS42131.1
Hypothetical protein; Pfam:pfam12900 Pyridoxamine 5'-phosphate oxidase.
  
    0.534
AMS42126.1
Hypothetical protein; Pfam:pfam10025 Uncharacterized conserved protein (DUF2267).
       0.468
AMS42566.1
Hypothetical protein; Pfam:pfam00106 short chain dehydrogenase.
  
     0.446
AMS40963.1
PTS galactitol transporter subunit IIC; Pfam:pfam03611 PTS system sugar-specific permease component.
  
    0.428
AMS43446.1
ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain.
 
 
 0.426
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.