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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42143.1Hypothetical protein; Pfam:pfam00122 E1-E2 ATPase. (622 aa)    
Predicted Functional Partners:
AMS40582.1
ATPase; Pfam:pfam00122 E1-E2 ATPase.
 
 
0.694
AMS42144.1
Membrane protein; Pfam:pfam13194 Domain of unknown function (DUF4010).
       0.694
AMS40583.1
Hypothetical protein; Pfam:pfam00403 Heavy-metal-associated domain.
 
 
 0.674
AMS42146.1
Hypothetical protein; Pfam:pfam00122 E1-E2 ATPase.
 
 
0.603
AMS42145.1
Hypothetical protein.
 
     0.580
AMS40578.1
Hypothetical protein; Pfam:pfam07731 Multicopper oxidase.
 
  
 0.486
AMS42142.1
Pfam:pfam13520 Amino acid permease.
     
 0.441
AMS42140.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
     
 0.406
AMS42973.1
5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.404
AMS41266.1
Pfam:pfam07732 Multicopper oxidase.
 
  
 0.402
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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