Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42146.1Hypothetical protein; Pfam:pfam00122 E1-E2 ATPase. (867 aa)    
Predicted Functional Partners:
AMS39086.1
Pfam:pfam00175 Oxidoreductase NAD-binding domain.
    
 0.756
AMS42147.1
Hypothetical protein; Pfam:pfam02525 Flavodoxin-like fold.
       0.740
AMS39932.1
Membrane protein; Pfam:pfam02308 MgtC family.
 
 
 0.728
AMS42134.1
Aminoglycoside phosphotransferase; Pfam:pfam13671 AAA domain.
 
    0.702
AMS38999.1
Pfam:pfam05114 Protein of unknown function (DUF692); Belongs to the UPF0276 family.
   
    0.678
AMS42143.1
Hypothetical protein; Pfam:pfam00122 E1-E2 ATPase.
 
 
0.627
AMS44303.1
Transcriptional regulator, LuxR family; Pfam:pfam12697 Alpha/beta hydrolase family.
 
 0.619
AMS38998.1
Membrane protein; Pfam:pfam10048 Predicted integral membrane protein (DUF2282).
   
    0.595
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 
 0.594
rpsM
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
   0.586
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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