STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42150.1Hypothetical protein; Pfam:pfam04972 BON domain. (215 aa)    
Predicted Functional Partners:
AMS40537.1
Hypothetical protein.
  
  
 0.833
AMS43137.1
CsbD family protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
 
    0.798
AMS42149.1
Hypothetical protein; Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain.
 
  
 0.764
AMS39625.1
Hypothetical protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.693
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.624
AMS42151.1
Hypothetical protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.554
AMS42152.1
Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.
     
 0.538
AMS43408.1
Hypothetical protein; Pfam:pfam03724 META domain.
   
  
 0.532
AMS42713.1
Hypothetical protein; Pfam:pfam07311 Dodecin.
 
    0.528
AMS39711.1
Peptidoglycan-binding protein LysM; Pfam:pfam01476 LysM domain.
  
  
 0.501
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.