Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42156.1Pfam:pfam00916 Sulfate transporter family. (603 aa)    
Predicted Functional Partners:
AMS42158.1
Beta-lactamase-like; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
 
     0.768
AMS42157.1
Oxidoreductase; Pfam:pfam04273 Putative phosphatase (DUF442).
 
     0.765
AMS42161.1
Pfam:pfam11127 Protein of unknown function (DUF2892).
 
     0.732
AMS42159.1
Hypothetical protein.
 
    0.689
AMS42160.1
Putative membrane protein; Pfam:pfam14241 Domain of unknown function (DUF4341).
 
    0.674
AMS41334.1
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.590
AMS41864.1
NADH:ubiquinone oxidoreductase subunit M; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains.
  
 
 0.490
AMS43460.1
Permease; Pfam:pfam02080 TrkA-C domain.
 
 
 0.449
AMS43288.1
Cysteine desulfurase; Pfam:pfam12796 Ankyrin repeats (3 copies).
    
 
 0.447
AMS40221.1
Ankyrin; Pfam:pfam12796 Ankyrin repeats (3 copies).
    
 
 0.439
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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