Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS42165.1Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (424 aa)    
Predicted Functional Partners:
AMS42164.1
Putative two component transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.958
AMS40756.1
Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.836
AMS41757.1
Chemotaxis protein CheY; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.835
AMS42033.1
Pfam:pfam00486 Transcriptional regulatory protein, C terminal.
 
 
 0.833
AMS40759.1
Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.828
AMS41364.1
Chemotaxis protein CheY; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.824
phoB_1
Response regulator in two-component regulatory system with PhoR (CreC); Regulation of Pi uptake (OmpR family); Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.823
AMS40986.1
Chemotaxis protein CheY; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.822
arlR
Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.819
AMS38975.1
Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.813
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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