Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS42178.1RND transporter; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (335 aa)    
Predicted Functional Partners:
AMS42177.1
ABC transporter; Pfam:pfam12704 MacB-like periplasmic core domain.
 
 
 0.949
AMS42176.1
ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 
 0.916
AMS42247.1
Transporter; Pfam:pfam02321 Outer membrane efflux protein.
 
 0.825
AMS44151.1
ABC transporter permease protein; Pfam:pfam12704 MacB-like periplasmic core domain.
 
 
 0.794
AMS40277.1
Hypothetical protein; Pfam:pfam13437 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.793
AMS41821.1
Multidrug ABC transporter substrate-binding protein; Pfam:pfam12704 MacB-like periplasmic core domain.
 
 
 0.768
AMS43713.1
Acriflavine resistance protein B; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.690
AMS43245.1
RND multidrug efflux transporter MexF; Pfam:pfam00873 AcrB/AcrD/AcrF family.
 
 
 0.675
AMS39295.1
Efflux transporter, RND family, MFP subunit; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.660
AMS41823.1
Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.656
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.