Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMS39916.1 | AMS42183.1 | AA2016_0978 | AA2016_3261 | Hypothetical protein. | Pfam:pfam00293 NUDIX domain. | 0.515 |
| AMS39916.1 | rph | AA2016_0978 | AA2016_0093 | Hypothetical protein. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.927 |
| AMS40296.1 | AMS42183.1 | AA2016_1362 | AA2016_3261 | Helicase; Pfam:pfam00271 Helicase conserved C-terminal domain. | Pfam:pfam00293 NUDIX domain. | 0.520 |
| AMS40296.1 | nnrD | AA2016_1362 | AA2016_3754 | Helicase; Pfam:pfam00271 Helicase conserved C-terminal domain. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.791 |
| AMS40296.1 | rph | AA2016_1362 | AA2016_0093 | Helicase; Pfam:pfam00271 Helicase conserved C-terminal domain. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.511 |
| AMS41320.1 | AMS42183.1 | AA2016_2394 | AA2016_3261 | Hypothetical protein; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | Pfam:pfam00293 NUDIX domain. | 0.520 |
| AMS41320.1 | nnrD | AA2016_2394 | AA2016_3754 | Hypothetical protein; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.791 |
| AMS41320.1 | rph | AA2016_2394 | AA2016_0093 | Hypothetical protein; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.511 |
| AMS42183.1 | AMS39916.1 | AA2016_3261 | AA2016_0978 | Pfam:pfam00293 NUDIX domain. | Hypothetical protein. | 0.515 |
| AMS42183.1 | AMS40296.1 | AA2016_3261 | AA2016_1362 | Pfam:pfam00293 NUDIX domain. | Helicase; Pfam:pfam00271 Helicase conserved C-terminal domain. | 0.520 |
| AMS42183.1 | AMS41320.1 | AA2016_3261 | AA2016_2394 | Pfam:pfam00293 NUDIX domain. | Hypothetical protein; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | 0.520 |
| AMS42183.1 | AMS42367.1 | AA2016_3261 | AA2016_3445 | Pfam:pfam00293 NUDIX domain. | RNA helicase; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | 0.520 |
| AMS42183.1 | AMS42393.1 | AA2016_3261 | AA2016_3471 | Pfam:pfam00293 NUDIX domain. | RNA helicase; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | 0.520 |
| AMS42183.1 | gpt | AA2016_3261 | AA2016_3262 | Pfam:pfam00293 NUDIX domain. | Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily. | 0.476 |
| AMS42183.1 | nnrD | AA2016_3261 | AA2016_3754 | Pfam:pfam00293 NUDIX domain. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.846 |
| AMS42183.1 | rnr | AA2016_3261 | AA2016_3858 | Pfam:pfam00293 NUDIX domain. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.515 |
| AMS42183.1 | rph | AA2016_3261 | AA2016_0093 | Pfam:pfam00293 NUDIX domain. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.453 |
| AMS42367.1 | AMS42183.1 | AA2016_3445 | AA2016_3261 | RNA helicase; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | Pfam:pfam00293 NUDIX domain. | 0.520 |
| AMS42367.1 | nnrD | AA2016_3445 | AA2016_3754 | RNA helicase; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.791 |
| AMS42367.1 | rph | AA2016_3445 | AA2016_0093 | RNA helicase; Pfam:pfam00270 DEAD/DEAH box helicase; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.511 |
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