STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42207.1Hypothetical protein; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family. (229 aa)    
Predicted Functional Partners:
AMS40690.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 0.856
AMS42206.1
Hypothetical protein.
       0.773
AMS43773.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
  
     0.770
AMS42560.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.769
AMS40811.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.753
AMS42598.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.714
AMS41972.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.712
AMS43560.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.705
AMS44232.1
Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.696
AMS40429.1
acetyl-CoA acetyltransferase; Pfam:pfam00108 Thiolase, N-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.694
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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