Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42232.1Peptidase; Pfam:pfam01435 Peptidase family M48. (486 aa)    
Predicted Functional Partners:
AMS42233.1
1-aminocyclopropane-1-carboxylate deaminase; Pfam:pfam00155 Aminotransferase class I and II.
  
    0.633
AMS42231.1
Pfam:pfam01323 DSBA-like thioredoxin domain.
  
  
 0.564
AMS40243.1
Membrane protein; Pfam:pfam01551 Peptidase family M23.
 
 
   0.552
AMS42247.1
Transporter; Pfam:pfam02321 Outer membrane efflux protein.
  
  
 0.546
AMS43274.1
Pfam:pfam12532 Protein of unknown function (DUF3732).
   
   0.468
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.466
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.445
AMS39956.1
Hypothetical protein; Pfam:pfam03567 Sulfotransferase family.
   
 
 0.440
AMS39729.1
Transglycosylase; Pfam:pfam03562 MltA specific insert domain.
  
    0.432
AMS42229.1
Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.428
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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