Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AMS42234.1Hypothetical protein; Pfam:pfam00082 Subtilase family. (558 aa)    
Predicted Functional Partners:
AMS42235.1
Phospholipid phosphatase; Pfam:pfam01569 PAP2 superfamily.
 
     0.948
AMS42236.1
Hypothetical protein.
 
   
 0.913
AMS39959.1
Cell division protein FtsK; Pfam:pfam01580 FtsK/SpoIIIE family.
   
 
 0.608
AMS39116.1
Pfam:pfam00593 TonB dependent receptor.
   
 
 0.572
AMS39743.1
Pfam:pfam03190 Protein of unknown function, DUF255.
    
 
 0.558
AMS44255.1
Hypothetical protein; Pfam:pfam07411 Domain of unknown function (DUF1508).
    
 
 0.430
AMS44324.1
ABC transporter substrate-binding protein; Pfam:pfam02608 Basic membrane protein.
  
  
 0.427
AMS44236.1
Hypothetical protein; Pfam:pfam01471 Putative peptidoglycan binding domain.
  
 
 0.410
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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