Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AMS42252.1Exopolysaccharide production negative regulator. (272 aa)    
Predicted Functional Partners:
AMS42251.1
Hypothetical protein.
       0.773
AMS40349.1
Hypothetical protein.
  
     0.762
AMS42326.1
Hypothetical protein.
  
     0.759
AMS41245.1
Flagellar export protein FliJ.
  
     0.738
AMS42069.1
Pfam:pfam09832 Uncharacterized protein conserved in bacteria (DUF2059).
  
     0.730
AMS39705.1
Histidine kinase; Pfam:pfam13756 Stimulus-sensing domain.
  
 
 
 0.729
AMS43147.1
Hypothetical protein; Pfam:pfam10276 Zinc-finger domain.
  
     0.728
AMS44236.1
Hypothetical protein; Pfam:pfam01471 Putative peptidoglycan binding domain.
  
     0.722
AMS43604.1
Hypothetical protein.
  
     0.711
AMS40949.1
Pfam:pfam04311 Protein of unknown function (DUF459).
  
     0.700
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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