Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42258.1Heme biosynthesis protein HemY; Pfam:pfam01521 Iron-sulphur cluster biosynthesis; Belongs to the HesB/IscA family. (115 aa)    
Predicted Functional Partners:
AMS42320.1
Hypothetical protein; Pfam:pfam01592 NifU-like N terminal domain.
  
 
 0.874
AMS42862.1
Cysteine desulfarase; Pfam:pfam00266 Aminotransferase class-V.
 
 
 0.856
AMS43490.1
Folate-binding protein YgfZ; Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 
 0.812
AMS42257.1
Hypothetical protein; Pfam:pfam12681 Glyoxalase-like domain.
       0.773
AMS42259.1
Deoxyguanosinetriphosphate triphosphohydrolase; Pfam:pfam13286 Phosphohydrolase-associated domain; Belongs to the dGTPase family. Type 2 subfamily.
     
 0.773
AMS41719.1
Molecular chaperone DnaJ; Pfam:pfam05099 Tellurite resistance protein TerB.
  
 
 0.741
AMS39493.1
Iron transporter; Pfam:pfam08712 Scaffold protein Nfu/NifU N terminal.
  
 
 0.722
grxD
Glutaredoxin; Pfam:pfam00462 Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.698
AMS39908.1
MFS transporter; Pfam:pfam02779 Transketolase, pyrimidine binding domain.
  
  
 0.626
argS
Pfam:pfam00750 tRNA synthetases class I (R).
     
 0.590
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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