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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42275.1Pfam:pfam04430 Protein of unknown function (DUF498/DUF598). (128 aa)    
Predicted Functional Partners:
AMS42276.1
Pfam:pfam00494 Squalene/phytoene synthase.
 
     0.853
secD
Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
       0.818
yajC
Membrane protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
       0.667
AMS42272.1
ATPase AAA; Pfam:pfam05673 Protein of unknown function (DUF815).
 
     0.636
AMS42277.1
Hypothetical protein.
       0.500
AMS42278.1
Pfam:pfam04116 Fatty acid hydroxylase superfamily.
       0.485
AMS44348.1
HAD family hydrolase; Pfam:pfam13419 Haloacid dehalogenase-like hydrolase.
  
     0.442
AMS41365.1
Pfam:pfam12802 MarR family.
  
     0.428
AMS43410.1
Molybdenum cofactor biosynthesis protein MoaD; Pfam:pfam02597 ThiS family.
 
     0.428
AMS40724.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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