Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS42284.1Hypothetical protein; Pfam:pfam09925 Predicted membrane protein (DUF2157). (401 aa)    
Predicted Functional Partners:
AMS42285.1
Pfam:pfam14345 GDYXXLXY protein.
 
     0.955
AMS39425.1
Hypothetical protein.
  
     0.756
AMS43606.1
Pfam:pfam10098 Uncharacterized protein conserved in bacteria (DUF2336).
  
     0.724
AMS44078.1
Hypothetical protein; Pfam:pfam13502 AsmA-like C-terminal region.
  
     0.692
AMS39649.1
Hypothetical protein; Pfam:pfam07478 D-ala D-ala ligase C-terminus.
  
     0.681
AMS42793.1
Kinesin.
  
     0.669
AMS42870.1
Pfam:pfam13116 Protein of unknown function.
  
     0.664
AMS42261.1
Pfam:pfam05036 Sporulation related domain.
  
     0.650
AMS39377.1
Pfam:pfam13160 Protein of unknown function (DUF3995).
  
     0.639
AMS44357.1
Transporter.
  
     0.638
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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