Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42303.1Hypothetical protein; Pfam:pfam03928 Domain of unknown function (DUF336). (169 aa)    
Predicted Functional Partners:
AMS44055.1
2-hydroxy-acid oxidase; Pfam:pfam02754 Cysteine-rich domain.
  
  
 0.825
AMS42304.1
Homoserine O-acetyltransferase; Pfam:pfam00561 alpha/beta hydrolase fold; Belongs to the AB hydrolase superfamily. MetX family.
 
     0.793
AMS42305.1
Pfam:pfam00005 ABC transporter.
       0.638
AMS42306.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.638
AMS40128.1
Hydrogenase; Pfam:pfam00355 Rieske [2Fe-2S] domain.
  
     0.511
AMS39274.1
Aldehyde dehydrogenase; Pfam:pfam14518 Iron-containing redox enzyme.
 
    0.506
AMS40107.1
Hydrogenase; Pfam:pfam00355 Rieske [2Fe-2S] domain.
  
     0.499
AMS40108.1
Small subunit of phenylpropionate dioxygenase; Pfam:pfam00866 Ring hydroxylating beta subunit.
  
     0.499
AMS40127.1
Hypothetical protein; Pfam:pfam00866 Ring hydroxylating beta subunit.
  
     0.499
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
  
 0.491
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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