STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42311.1Pfam:pfam07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus. (609 aa)    
Predicted Functional Partners:
AMS39663.1
Esterase; Pfam:pfam06850 PHB de-polymerase C-terminus.
 
  
 0.982
AMS40293.1
acetoacetyl-CoA reductase; Pfam:pfam00106 short chain dehydrogenase.
 
 
 0.949
AMS44230.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
   
 
 0.933
AMS40291.1
Polyhydroxyalkanoate synthesis repressor PhaR; Pfam:pfam07879 PHB/PHA accumulation regulator DNA-binding domain.
 
   
 0.863
ackA
Hypothetical protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 0.770
AMS40278.1
Alpha/beta hydrolase; Pfam:pfam01734 Patatin-like phospholipase.
 
   
 0.657
AMS42314.1
Pfam:pfam00742 Homoserine dehydrogenase.
     
 0.559
AMS42313.1
Pfam:pfam00155 Aminotransferase class I and II.
  
    0.552
AMS42312.1
Hypothetical protein.
       0.545
AMS42310.1
Pfam:pfam08291 Peptidase M15.
       0.537
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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