STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42330.1MaoC family dehydratase; Pfam:pfam01575 MaoC like domain. (151 aa)    
Predicted Functional Partners:
AMS42329.1
Citrate lyase; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.961
AMS39823.1
ATP-binding protein; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.705
AMS43322.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.670
AMS43634.1
acetyl-CoA acetyltransferase; Pfam:pfam02803 Thiolase, C-terminal domain; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.626
AMS40420.1
Lipid-transfer protein.
 
 
 0.622
AMS40419.1
Hypothetical protein; Pfam:pfam12172 Rubredoxin-like zinc ribbon domain (DUF35_N).
 
   0.612
AMS42331.1
Pfam:pfam10098 Uncharacterized protein conserved in bacteria (DUF2336).
       0.586
AMS43879.1
Pfam:pfam08028 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.557
AMS42559.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
 0.556
AMS42599.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.552
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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