Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
gcvP-2Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (936 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
 
0.999
gcvH-2
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.999
AMS42337.1
Glycine cleavage system protein T; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 0.999
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 0.998
AMS41551.1
Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
 0.997
AMS43001.1
Glycine cleavage system T protein (Aminomethyltransferase); Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 0.995
AMS43018.1
Glycine cleavage system T protein (Aminomethyltransferase); Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 0.995
AMS40885.1
Sarcosine oxidase subunit alpha; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
  
 0.991
AMS44167.1
Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 0.991
AMS40762.1
Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 0.990
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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