Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMS42344.1 | AMS42345.1 | AA2016_3422 | AA2016_3423 | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain. | 0.788 |
AMS42344.1 | AMS42346.1 | AA2016_3422 | AA2016_3424 | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | Pfam:pfam07733 Bacterial DNA polymerase III alpha subunit. | 0.515 |
AMS42344.1 | ftsH | AA2016_3422 | AA2016_1390 | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.582 |
AMS42344.1 | mltG | AA2016_3422 | AA2016_4532 | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | 4-amino-4-deoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.495 |
AMS42345.1 | AMS42344.1 | AA2016_3423 | AA2016_3422 | Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain. | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | 0.788 |
AMS42345.1 | AMS42346.1 | AA2016_3423 | AA2016_3424 | Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain. | Pfam:pfam07733 Bacterial DNA polymerase III alpha subunit. | 0.497 |
AMS42346.1 | AMS42344.1 | AA2016_3424 | AA2016_3422 | Pfam:pfam07733 Bacterial DNA polymerase III alpha subunit. | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | 0.515 |
AMS42346.1 | AMS42345.1 | AA2016_3424 | AA2016_3423 | Pfam:pfam07733 Bacterial DNA polymerase III alpha subunit. | Pfam:pfam08240 Alcohol dehydrogenase GroES-like domain. | 0.497 |
AMS42346.1 | ftsH | AA2016_3424 | AA2016_1390 | Pfam:pfam07733 Bacterial DNA polymerase III alpha subunit. | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.411 |
ftsH | AMS42344.1 | AA2016_1390 | AA2016_3422 | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | 0.582 |
ftsH | AMS42346.1 | AA2016_1390 | AA2016_3424 | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | Pfam:pfam07733 Bacterial DNA polymerase III alpha subunit. | 0.411 |
ftsH | mltG | AA2016_1390 | AA2016_4532 | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 4-amino-4-deoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.473 |
mltG | AMS42344.1 | AA2016_4532 | AA2016_3422 | 4-amino-4-deoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Acyltransferase; Pfam:pfam13508 Acetyltransferase (GNAT) domain. | 0.495 |
mltG | ftsH | AA2016_4532 | AA2016_1390 | 4-amino-4-deoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.473 |