Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42374.1Flagellar motor protein MotB; Pfam:pfam00691 OmpA family. (185 aa)    
Predicted Functional Partners:
AMS41033.1
Pfam:pfam06429 Flagellar basal body rod FlgEFG protein C-terminal; Belongs to the flagella basal body rod proteins family.
   
 
 0.597
pal
Membrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
     0.567
AMS41012.1
Pfam:pfam07559 Flagellar basal body protein FlaE.
   
 
 0.565
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.557
AMS42375.1
Hypothetical protein; Pfam:pfam05173 Dihydrodipicolinate reductase, C-terminus; Belongs to the DapB family.
  
  
 0.553
AMS42373.1
Pfam:pfam00583 Acetyltransferase (GNAT) family.
       0.541
AMS42372.1
3-mercaptopyruvate sulfurtransferase; Pfam:pfam00581 Rhodanese-like domain.
       0.536
cpoB
Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.524
AMS42370.1
Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
       0.507
AMS42371.1
Ala-tRNA(Pro) hydrolase; Pfam:pfam01411 tRNA synthetases class II (A).
       0.507
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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