Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMS42376.1Pfam:pfam06718 Protein of unknown function (DUF1203). (141 aa)    
Predicted Functional Partners:
AMS38948.1
Hypothetical protein; Pfam:pfam00583 Acetyltransferase (GNAT) family.
  
     0.588
AMS39022.1
NIPSNAP family containing protein; Pfam:pfam07978 NIPSNAP.
  
     0.493
AMS40670.1
Hypothetical protein; Pfam:pfam02805 Metal binding domain of Ada.
 
     0.479
AMS39626.1
DoxX family protein; Pfam:pfam07681 DoxX.
  
     0.470
AMS42375.1
Hypothetical protein; Pfam:pfam05173 Dihydrodipicolinate reductase, C-terminus; Belongs to the DapB family.
       0.469
AMS39805.1
Hypothetical protein.
  
     0.445
AMS43508.1
Pfam:pfam10101 Predicted membrane protein (DUF2339).
  
     0.428
AMS42374.1
Flagellar motor protein MotB; Pfam:pfam00691 OmpA family.
 
     0.426
AMS39791.1
Metal-dependent hydrolase; Pfam:pfam03372 Endonuclease/Exonuclease/phosphatase family.
  
     0.425
AMS41295.1
Hypothetical protein.
  
     0.420
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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