close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42401.1Glyoxylate carboligase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family. (593 aa)    
Predicted Functional Partners:
AMS42402.1
Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the hyi family.
 
 
 0.987
AMS40087.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
  
  
 0.918
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
    
 0.916
glcB-2
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
    
 0.916
icl
Pfam:pfam00463 Isocitrate lyase family.
     
 0.912
AMS44055.1
2-hydroxy-acid oxidase; Pfam:pfam02754 Cysteine-rich domain.
     
 0.906
AMS38951.1
Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
    
 0.903
AMS40120.1
Dihydrofolate reductase; Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
    
 0.903
AMS42403.1
Tartronate semialdehyde reductase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
 
 
 0.903
AMS44390.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
     
 0.903
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.