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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42402.1Pfam:pfam01261 Xylose isomerase-like TIM barrel; Belongs to the hyi family. (265 aa)    
Predicted Functional Partners:
AMS42401.1
Glyoxylate carboligase; Pfam:pfam02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Belongs to the TPP enzyme family.
 
 
 0.987
AMS40087.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
 
 
  0.926
AMS44390.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
 
 
  0.926
AMS38951.1
Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
  
 
 0.910
AMS40120.1
Dihydrofolate reductase; Pfam:pfam00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
  
 
 0.910
AMS42403.1
Tartronate semialdehyde reductase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
  
 0.835
AMS42400.1
Pfam:pfam01614 Bacterial transcriptional regulator.
     
 0.484
AMS40835.1
TtuD3 hydroxypyruvate reductase; Pfam:pfam13660 Domain of unknown function (DUF4147).
 
   
 0.466
AMS43263.1
2-hydroxy-3-oxopropionate reductase; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
  
 0.426
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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