STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42408.1Globin; Pfam:pfam01152 Bacterial-like globin. (159 aa)    
Predicted Functional Partners:
AMS39926.1
Hypothetical protein.
  
     0.690
AMS40803.1
Isomerase; Pfam:pfam12680 SnoaL-like domain.
  
     0.652
AMS42409.1
Hydrolase; Pfam:pfam04307 Predicted membrane-bound metal-dependent hydrolase (DUF457).
       0.620
AMS40645.1
Hypothetical protein.
  
     0.616
AMS39933.1
Hypothetical protein; Pfam:pfam01047 MarR family.
  
     0.596
AMS42407.1
Hypothetical protein.
 
     0.596
AMS40649.1
Pfam:pfam01323 DSBA-like thioredoxin domain.
 
  
 0.563
AMS40404.1
Hypothetical protein.
  
     0.550
AMS39469.1
Pfam:pfam06441 Epoxide hydrolase N terminus.
  
     0.521
AMS39934.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.521
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.