Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42478.1Beta-lactamase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. (290 aa)    
Predicted Functional Partners:
AMS42477.1
Modification methylase DpnIIB; Pfam:pfam01555 DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
     
 0.466
AMS41579.1
Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
 
     0.429
AMS42479.1
Hypothetical protein.
       0.413
AMS40974.1
Pfam:pfam05951 Bacterial protein of unknown function (DUF882).
  
    0.406
AMS42310.1
Pfam:pfam08291 Peptidase M15.
  
    0.406
AMS42016.1
Abortive infection protein.
  
    0.402
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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