Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42566.1Hypothetical protein; Pfam:pfam00106 short chain dehydrogenase. (296 aa)    
Predicted Functional Partners:
AMS42565.1
Short-chain dehydrogenase/reductase; Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.909
AMS42554.1
Pfam:pfam00106 short chain dehydrogenase.
  
     0.762
AMS42595.1
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.737
AMS42573.1
Hypothetical protein.
 
 
 0.711
AMS42559.1
Hypothetical protein; Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain.
 
  0.687
AMS42574.1
Hypothetical protein; Pfam:pfam01144 Coenzyme A transferase.
 
  
 0.664
AMS42570.1
Short-chain dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
     0.663
AMS42599.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
 
  0.657
AMS42600.1
Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family.
 
 0.615
AMS39881.1
Short-chain dehydrogenase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
     0.611
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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