STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMS42621.1Hypothetical protein; Pfam:pfam01323 DSBA-like thioredoxin domain. (225 aa)    
Predicted Functional Partners:
AMS42620.1
Bicyclomycin resistance protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.736
AMS43317.1
Arsenate reductase; Pfam:pfam03960 ArsC family.
   
 
 0.670
AMS43813.1
Pfam:pfam03960 ArsC family; Belongs to the ArsC family.
   
 
 0.670
AMS42408.1
Globin; Pfam:pfam01152 Bacterial-like globin.
 
  
 0.507
AMS43891.1
Preprotein translocase subunit TatC.
  
  
 0.443
AMS42619.1
Pfam:pfam06776 Invasion associated locus B (IalB) protein.
       0.438
AMS43070.1
Pfam:pfam03358 NADPH-dependent FMN reductase.
 
    0.429
AMS41422.1
FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
 
    0.411
AMS42622.1
Pfam:pfam13508 Acetyltransferase (GNAT) domain.
       0.405
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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