Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMS42632.1Pfam:pfam07886 BA14K-like protein. (168 aa)    
Predicted Functional Partners:
AMS43779.1
Hypothetical protein.
  
     0.648
AMS44082.1
ATPase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.636
AMS42979.1
Putative membrane protein.
  
     0.625
AMS42069.1
Pfam:pfam09832 Uncharacterized protein conserved in bacteria (DUF2059).
  
     0.600
AMS39890.1
Membrane protein; Pfam:pfam02974 Protease inhibitor Inh.
  
     0.561
AMS44392.1
Pfam:pfam12802 MarR family.
  
     0.559
AMS40668.1
Pfam:pfam09898 Uncharacterized protein conserved in bacteria (DUF2125).
  
     0.536
AMS40486.1
Hypothetical protein; Pfam:pfam13747 Domain of unknown function (DUF4164).
  
     0.534
AMS44116.1
Hypothetical protein; Pfam:pfam09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme.
  
     0.529
AMS41516.1
Pfam:pfam11924 Protein of unknown function (DUF3442).
  
     0.525
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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