Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AMS42655.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
AMS39821.1
Adhesin; Pfam:pfam03797 Autotransporter beta-domain.
  
     0.671
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.589
AMS43310.1
Phosphotransferase; Pfam:pfam00485 Phosphoribulokinase / Uridine kinase family.
 
     0.581
AMS43518.1
Transcriptional regulator, repressor protein MphR(A).
  
     0.579
AMS39360.1
Hypothetical protein.
  
     0.567
AMS42307.1
Nitrate ABC transporter substrate-binding protein; Pfam:pfam09084 NMT1/THI5 like.
  
     0.538
AMS42654.1
Pfam:pfam01914 MarC family integral membrane protein.
       0.465
AMS43267.1
Pfam:pfam03797 Autotransporter beta-domain.
  
     0.458
AMS43027.1
Hypothetical protein; Pfam:pfam05014 Nucleoside 2-deoxyribosyltransferase.
  
     0.435
AMS40067.1
Pfam:pfam07690 Major Facilitator Superfamily.
 
     0.433
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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