Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMS42663.1ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein. (428 aa)    
Predicted Functional Partners:
AMS42661.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.907
AMS42662.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.907
AMS42658.1
Hypothetical protein; Pfam:pfam13580 SIS domain.
 
     0.837
AMS40600.1
ABC transporter permease.
 
 
 0.701
AMS42660.1
Hypothetical protein; Pfam:pfam00480 ROK family.
 
  
 0.673
AMS40601.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.665
AMS39534.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.638
AMS41132.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.635
ugpE-2
SN-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.632
AMS42659.1
Hypothetical protein; Pfam:pfam07702 UTRA domain.
 
 
   0.619
Your Current Organism:
Aminobacter aminovorans
NCBI taxonomy Id: 83263
Other names: A. aminovorans, ATCC 23314, ATCC 29600, Aminobacter heintzii, CCUG 2081, CIP 106737, Chelatobacter heintzii, DSM 10368, DSM 7048, JCM 7852, KCTC 2477, LMG 2122, LMG:2122, NCCB 26039, NCIB 9039, NCIB:9039, NCIMB 9039, NCTC 10684, Pseudomonas aminovorans, VKM B-2058
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